BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039B11LP1|AL430665
(987 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 1920 0.0
>3x_Contig1622
Length = 13445
Score = 1920 bits (968), Expect = 0.0
Identities = 985/988 (99%), Gaps = 2/988 (0%)
Strand = Plus / Minus
Query: 1 gaaacgatcggtacttacgacttcttagtcttcctagaaaaatatccagagttcaacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5941 gaaacgatcggtacttacgacttcttagtcttcctagaaaaatatccagagttcaacgac 5882
Query: 61 atattgacaggatctgcaccatactcattgttgataccgacacagagatcattactaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5881 atattgacaggatctgcaccatactcattgttgataccgacacagagatcattactaatg 5822
Query: 121 gaaggtattgatctcaattacaccaaattagagaagtttttaaaacttcatattttaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5821 gaaggtattgatctcaattacaccaaattagagaagtttttaaaacttcatattttaccc 5762
Query: 181 gaaaatcaaacaagtttattgttagaatgtgcagataagattgatacaactgcaggtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5761 gaaaatcaaacaagtttattgttagaatgtgcagataagattgatacaactgcaggtgaa 5702
Query: 241 tctttaaaatgtagagaagcttcagataatgttttgctactcagtgtgatagatggtatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5701 tctttaaaatgtagagaagcttcagataatgttttgctactcagtgtgatagatggtatt 5642
Query: 301 gataaagaagttagaattttgaagaaaggctgcacgagcaacaacagcgcatcatgcgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5641 gataaagaagttagaattttgaagaaaggctgcacgagcaacaacagcgcatcatgcgtt 5582
Query: 361 ttcttgattgatagaccaatttctgttaactggttaagtaaggaaaggtacagcatcacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5581 ttcttgattgatagaccaatttctgttaactggttaagtaaggaaaggtacagcatcacg 5522
Query: 421 ttgcctgccctctcttttgcattaggtactgttttaggcacaatgtttttgttttcttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5521 ttgcctgccctctcttttgcattaggtactgttttaggcacaatgtttttgttttcttta 5462
Query: 481 cttttgtgcgttattgtgacatgtgcccataagaagccatcaaaaggatataaatctcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5461 cttttgtgcgttattgtgacatgtgcccataagaagccatcaaaaggatataaatctcgc 5402
Query: 541 agagcttctgatgcagaaaacaacgaggaagaaccattaattccgtctgaaaacagttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 agagcttctgatgcagaaaacaacgaggaagaaccattaattccgtctgaaaacagttct 5342
Query: 601 gctgttgttccaaattccagctatcaagccactgttaacgctgctagaaatcataaccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5341 gctgttgttccaaattccagctatcaagccactgttaacgctgctagaaatcataaccaa 5282
Query: 661 gtttcacccacttttgaaagctcgtattcctcaaatgcgaaaacagcaccaatgaaagta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 gtttcacccacttttgaaagctcgtattcctcaaatgcgaaaacagcaccaatgaaagta 5222
Query: 721 ggccaaaatatcaccgaagttttagctagggattgataaaaaaaactatgtcctgattta 780
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 ggccaaaatatcaccgaaggtttagctagggattgataaaaaaaactatgtcctgattta 5162
Query: 781 aatgttgctggttaacagatcaggaactatcttttttgctggccaaacagtagtggtaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 aatgttgctggttaacagatcaggaactatcttttttgctggccaaacagtagtggtaat 5102
Query: 841 ggatacgagtccatactgaagtataaggaataatgaattttctactgactgtataaaact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 ggatacgagtccatactgaagtataaggaataatgaattttctactgactgtataaaact 5042
Query: 901 taaatatatccaattgataaatataatggagactgttaagcgaarggtcctgaactattt 960
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5041 taaatatatccaattgataaatataatggagactgttaagcgaa-ggtcctgaactattt 4983
Query: 961 tctgaagatgcgattag-agtgatttac 987
||||||||||||||||| ||||||||||
Sbjct: 4982 tctgaagatgcgattagcagtgatttac 4955
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8356
Number of Sequences: 1807
Number of extensions: 8356
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)